The effects of endurance training on body composition and the pituitary-thyroid axis were studied in 29 healthy, young (mean age, 28.7 yr), regularly menstruating women. Women who were initially jogging a mean of 13.5 miles/week were selected for this study to minimize dropouts. Body composition, measured by hydrostatic weighing, and nonfasting plasma concentrations of T4, T3, rT3, TSH, and TRH-stimulated TSH, measured by RIA, were examined initially and after each subject's weekly mileage had increased to 30 miles ( delta 30) for at least 2 consecutive weeks. Two subjects were found to have compensated primary hypothyroidism and were not included in the subsequent data analysis. At delta 30, mean body weight did not change, mean fat weight decreased (- 1.02 kg; P less than 0.005), and mean lean weight increased (+0.75 kg; P less than 0.05). T4 and unstimulated TSH did not change. However, mean (+/-SE) T3 decreased from 107.2 +/- 4.4 to 97.9 +/- 3.4 ng/dl (P less than 0.025), and mean rT3 decreased from 170.9 +/- 13.9 to 154.6 +/- 13.2 pg/ml (P less than 0.025). The decreases in T3 and rT3 were accompanied by significantly greater TSH responses to TRH stimulation [mean (+/-SE) area under TSH curve, 1381.4 +/- 123 vs. 1712.8 +/- 202 micron IU/ml.min; P less than 0.01]. These results indicate that physically active women who undergo additional endurance training 1) become more lean without a change in total weight, and 2) have changes in T3, rT3, and TRH-stimulated TSH indicative of mild thyroidal impairment.